Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AC036164.1-201ENST00000570544 333 ntBASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.61■□□□□ 0.25
SHKBP1Q8TBC3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AL365203.3-201ENST00000609742 2057 ntBASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHKBP1Q8TBC3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 ME2P1-201ENST00000426028 1970 ntBASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 RPS2P32-201ENST00000439199 892 ntBASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 AC010319.3-201ENST00000597028 470 ntBASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHKBP1Q8TBC3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms