Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO3Q8TAP4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 AC006058.4-201ENST00000624016 1670 ntBASIC16.88■□□□□ 0.29
LMO3Q8TAP4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 AC092183.1-201ENST00000469884 875 ntBASIC16.88■□□□□ 0.29
LMO3Q8TAP4 AC015910.1-201ENST00000579400 975 ntBASIC16.88■□□□□ 0.29
LMO3Q8TAP4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO3Q8TAP4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 MST1L-201ENST00000442552 2185 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC241585.1-201ENST00000433527 519 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC114501.2-201ENST00000439631 535 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC004890.2-204ENST00000481968 304 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC004461.2-201ENST00000629517 803 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 TNRC18P2-201ENST00000417666 2714 ntBASIC16.87■□□□□ 0.29
LMO3Q8TAP4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.87■□□□□ 0.29
LMO3Q8TAP4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LMO3Q8TAP4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms