Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 SPDYE22P-201ENST00000582158 798 ntBASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AL662799.1-202ENST00000614205 422 ntBASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AC004840.1-201ENST00000636359 365 ntBASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 FAM45BP-202ENST00000592932 1624 ntBASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDND2Q8NHS1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 SERBP1P3-201ENST00000459980 809 ntBASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 AC135586.1-201ENST00000539323 574 ntBASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 AL512361.1-201ENST00000554200 418 ntBASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 AC025048.6-201ENST00000634326 1161 ntBASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 AL358472.5-202ENST00000641448 1267 ntBASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDND2Q8NHS1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 LINC01144-201ENST00000626198 1710 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AC005622.1-201ENST00000636801 1703 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 GGT3P-204ENST00000453783 1664 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AC073347.1-201ENST00000421633 2643 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms