Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.99□□□□□ -0.01
SIMC1Q8NDZ2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 METTL21AP1-201ENST00000438852 635 ntBASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 AC092364.2-202ENST00000597012 1073 ntBASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SIMC1Q8NDZ2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AP001282.1-201ENST00000531301 1499 ntBASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 CYMP-203ENST00000474680 1263 ntBASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AC069262.1-201ENST00000539058 672 ntBASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AL512356.2-201ENST00000546955 174 ntBASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 AC063926.3-201ENST00000624734 5658 ntBASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SIMC1Q8NDZ2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms