Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL391256.1-201ENST00000443260 1855 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AL139008.1-201ENST00000437894 228 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RPL18P13-201ENST00000478088 569 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 PRSS30P-206ENST00000641773 873 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 AL354989.2-201ENST00000435838 1540 ntBASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 AC243562.2-201ENST00000561247 970 ntBASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 AC006453.1-201ENST00000636037 1257 ntBASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 NEFHP1-201ENST00000412845 2629 ntBASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC168Q8NDH2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 AC079112.1-201ENST00000454972 939 ntBASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.08□□□□□ -0.31
CCDC168Q8NDH2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 LINC02012-201ENST00000608206 1725 ntBASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 PDIA3P2-201ENST00000428073 158 ntBASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 AC078991.1-201ENST00000437297 610 ntBASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms