Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 AL391825.1-201ENST00000457671 1364 ntBASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAM1L1Q8N609 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC007541.1-201ENST00000570282 1469 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC007950.2-201ENST00000615045 2347 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 KRT18P43-201ENST00000469825 1281 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 RRP7BP-205ENST00000566851 833 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC138761.1-201ENST00000584393 385 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 AC099568.2-201ENST00000609194 695 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 SLC7A15P-201ENST00000424028 1363 ntBASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
TRAM1L1Q8N609 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAM1L1Q8N609 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 CICP13-201ENST00000422015 2789 ntBASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 AL133267.1-201ENST00000398220 340 ntBASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 AL353779.1-201ENST00000434793 351 ntBASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 AC015910.1-201ENST00000579400 975 ntBASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 AC127383.1-201ENST00000444697 1800 ntBASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 AL121723.1-201ENST00000445194 1519 ntBASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TRAM1L1Q8N609 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms