Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 ACKR1-201ENST00000368121 1240 ntBASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 BCYRN1-201ENST00000418539 200 ntBASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 PFN1P12-201ENST00000455938 534 ntBASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 RPL13AP20-201ENST00000459725 609 ntBASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 AC107373.2-201ENST00000607735 490 ntBASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPAS3Q8IXF0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AC018892.3-201ENST00000623986 2499 ntBASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 C2orf27AP3-201ENST00000434123 579 ntBASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AC093813.1-201ENST00000605066 256 ntBASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AL354718.3-201ENST00000616414 581 ntBASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CR382287.1-201ENST00000623954 586 ntBASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 AC008687.7-202ENST00000637404 953 ntBASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPAS3Q8IXF0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 DUX4L45-201ENST00000566406 1057 ntBASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 RN7SL560P-201ENST00000577943 264 ntBASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 AC015910.1-201ENST00000579400 975 ntBASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 AC103810.3-201ENST00000583567 96 ntBASIC16.27■□□□□ 0.2
NPAS3Q8IXF0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms