Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 AC004832.2-201ENST00000426397 482 ntBASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 AC007292.2-201ENST00000593524 1812 ntBASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.91■□□□□ 0.14
CRLF3Q8IUI8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 IGLL3P-201ENST00000412472 434 ntBASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 UPF3AP3-201ENST00000420996 769 ntBASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 DNAJB3-201ENST00000446806 729 ntBASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 AC245100.5-201ENST00000452108 331 ntBASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CRLF3Q8IUI8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 RPSAP43-201ENST00000402237 625 ntBASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 GPX1P2-201ENST00000429271 606 ntBASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 OR7E47P-204ENST00000575924 449 ntBASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CRLF3Q8IUI8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms