Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 AL645728.1-201ENST00000366221 2101 ntBASIC15.21■□□□□ 0.03
RAB43Q86YS6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 AP005018.1-201ENST00000525475 301 ntBASIC15.21■□□□□ 0.03
RAB43Q86YS6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 AC008738.7-201ENST00000609744 511 ntBASIC15.21■□□□□ 0.03
RAB43Q86YS6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 AL031731.1-201ENST00000642131 2094 ntBASIC15.21■□□□□ 0.03
RAB43Q86YS6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB43Q86YS6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB43Q86YS6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB43Q86YS6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB43Q86YS6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
RAB43Q86YS6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RAB43Q86YS6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RAB43Q86YS6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 RN7SL692P-201ENST00000464677 288 ntBASIC15.2■□□□□ 0.02
RAB43Q86YS6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 ZNF890P-202ENST00000530367 1156 ntBASIC15.2■□□□□ 0.02
RAB43Q86YS6 AC135586.1-201ENST00000539323 574 ntBASIC15.2■□□□□ 0.02
RAB43Q86YS6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 AC009407.1-201ENST00000568958 598 ntBASIC15.2■□□□□ 0.02
RAB43Q86YS6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB43Q86YS6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB43Q86YS6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 AC006538.1-201ENST00000567905 1585 ntBASIC15.19■□□□□ 0.02
RAB43Q86YS6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms