Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 AC022188.1-201ENST00000620960 1664 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.11■□□□□ 0.97
NME9Q86XW9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 AC025181.2-201ENST00000606994 802 ntBASIC21.11■□□□□ 0.97
NME9Q86XW9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NME9Q86XW9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NME9Q86XW9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.11■□□□□ 0.97
NME9Q86XW9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.1■□□□□ 0.97
NME9Q86XW9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 KRT8P44-201ENST00000441609 1350 ntBASIC21.1■□□□□ 0.97
NME9Q86XW9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.1■□□□□ 0.97
NME9Q86XW9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.1■□□□□ 0.97
NME9Q86XW9 RNU1-114P-201ENST00000365297 166 ntBASIC21.1■□□□□ 0.97
NME9Q86XW9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.1■□□□□ 0.97
NME9Q86XW9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.1■□□□□ 0.97
NME9Q86XW9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NME9Q86XW9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.1■□□□□ 0.97
NME9Q86XW9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.1■□□□□ 0.97
NME9Q86XW9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.1■□□□□ 0.97
NME9Q86XW9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NME9Q86XW9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.1■□□□□ 0.97
NME9Q86XW9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.1■□□□□ 0.97
NME9Q86XW9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NME9Q86XW9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.09■□□□□ 0.97
NME9Q86XW9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.09■□□□□ 0.97
NME9Q86XW9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.09■□□□□ 0.97
NME9Q86XW9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.09■□□□□ 0.97
NME9Q86XW9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.09■□□□□ 0.97
NME9Q86XW9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.09■□□□□ 0.97
NME9Q86XW9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.09■□□□□ 0.97
NME9Q86XW9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.09■□□□□ 0.97
NME9Q86XW9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.09■□□□□ 0.97
NME9Q86XW9 AC079316.1-201ENST00000548397 411 ntBASIC21.09■□□□□ 0.97
NME9Q86XW9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 DUX4L45-201ENST00000566406 1057 ntBASIC21.09■□□□□ 0.97
NME9Q86XW9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.09■□□□□ 0.97
NME9Q86XW9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.09■□□□□ 0.97
NME9Q86XW9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NME9Q86XW9 AP003680.1-201ENST00000598970 3660 ntBASIC21.09■□□□□ 0.97
NME9Q86XW9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NME9Q86XW9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
NME9Q86XW9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NME9Q86XW9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 KRT8P35-201ENST00000483942 1338 ntBASIC21.08■□□□□ 0.97
NME9Q86XW9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NME9Q86XW9 AC006001.1-201ENST00000325130 474 ntBASIC21.08■□□□□ 0.97
NME9Q86XW9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms