Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP50Q70EL3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USP50Q70EL3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP50Q70EL3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP50Q70EL3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP50Q70EL3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
USP50Q70EL3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.33■□□□□ 0.52
USP50Q70EL3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 RNF216P1-203ENST00000404404 2427 ntBASIC18.32■□□□□ 0.52
USP50Q70EL3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP50Q70EL3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.32■□□□□ 0.52
USP50Q70EL3 CEP164P1-201ENST00000455142 418 ntBASIC18.32■□□□□ 0.52
USP50Q70EL3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.32■□□□□ 0.52
USP50Q70EL3 AC106820.3-201ENST00000561653 397 ntBASIC18.32■□□□□ 0.52
USP50Q70EL3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 AC006453.1-201ENST00000636037 1257 ntBASIC18.32■□□□□ 0.52
USP50Q70EL3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
USP50Q70EL3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.32■□□□□ 0.52
USP50Q70EL3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP50Q70EL3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.31■□□□□ 0.52
USP50Q70EL3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
USP50Q70EL3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.31■□□□□ 0.52
USP50Q70EL3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.31■□□□□ 0.52
USP50Q70EL3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.31■□□□□ 0.52
USP50Q70EL3 AC104073.2-201ENST00000453737 312 ntBASIC18.31■□□□□ 0.52
USP50Q70EL3 RN7SL181P-201ENST00000462921 277 ntBASIC18.31■□□□□ 0.52
USP50Q70EL3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.31■□□□□ 0.52
USP50Q70EL3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.31■□□□□ 0.52
USP50Q70EL3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
USP50Q70EL3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.31■□□□□ 0.52
USP50Q70EL3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.31■□□□□ 0.52
USP50Q70EL3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP50Q70EL3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP50Q70EL3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP50Q70EL3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 AC004899.1-201ENST00000424687 1714 ntBASIC18.3■□□□□ 0.52
USP50Q70EL3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.3■□□□□ 0.52
USP50Q70EL3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.3■□□□□ 0.52
USP50Q70EL3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP50Q70EL3 EIF3FP3-201ENST00000434851 1086 ntBASIC18.3■□□□□ 0.52
USP50Q70EL3 FGFR3P1-201ENST00000449999 601 ntBASIC18.3■□□□□ 0.52
USP50Q70EL3 AC125604.1-201ENST00000496255 707 ntBASIC18.3■□□□□ 0.52
USP50Q70EL3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.3■□□□□ 0.52
USP50Q70EL3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.3■□□□□ 0.52
USP50Q70EL3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.3■□□□□ 0.52
USP50Q70EL3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.3■□□□□ 0.52
USP50Q70EL3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms