Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC243562.2-201ENST00000561247 970 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 PDPK2P-202ENST00000562415 1191 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AL109954.1-202ENST00000564051 2148 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC024267.1-201ENST00000582320 895 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AC105250.1-201ENST00000509378 2057 ntBASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMARCD3Q6STE5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AC007967.2-201ENST00000432613 625 ntBASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 KRT18P2-201ENST00000447938 1258 ntBASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AC112191.1-201ENST00000523689 701 ntBASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AC073389.1-201ENST00000595595 795 ntBASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 AC090616.6-203ENST00000579186 1945 ntBASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMARCD3Q6STE5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.5□□□□□ -0.09
SMARCD3Q6STE5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms