Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 MIR770-201ENST00000390219 98 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 PDPK2P-202ENST00000562415 1191 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC011467.4-201ENST00000594891 528 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC093028.1-201ENST00000622998 982 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC006504.5-208ENST00000588784 2401 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 AC025580.3-201ENST00000617932 1424 ntBASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXR1Q6PIV2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 NFIC-211ENST00000641145 8399 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 FAM8A3P-201ENST00000427218 844 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 KRT19P2-202ENST00000557173 1012 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 AL805961.1-202ENST00000641562 540 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 AC013726.1-201ENST00000563747 2285 ntBASIC16.61■□□□□ 0.25
FOXR1Q6PIV2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 TSEN15P1-201ENST00000423257 515 ntBASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms