Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 BOLA2P3-201ENST00000404566 256 ntBASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AC120045.2-201ENST00000567334 178 ntBASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AL049840.4-201ENST00000602422 811 ntBASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC62Q6P9F0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 MIR6799-201ENST00000620297 69 ntBASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC62Q6P9F0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 AL121723.1-201ENST00000445194 1519 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 AC011477.6-201ENST00000604980 1927 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms