Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
MRPL54Q6P161 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.02□□□□□ -0.48
MRPL54Q6P161 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 AL845331.1-201ENST00000424978 1190 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 RN7SL606P-201ENST00000472779 293 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 AC091167.2-201ENST00000579581 588 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 AC011467.2-201ENST00000598425 242 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 AL138966.2-201ENST00000621997 464 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 AL031432.5-201ENST00000641059 760 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 KRT8P44-201ENST00000441609 1350 ntBASIC12.02□□□□□ -0.49
MRPL54Q6P161 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
MRPL54Q6P161 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.02□□□□□ -0.49
MRPL54Q6P161 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 AC126365.1-201ENST00000578585 1514 ntBASIC12.01□□□□□ -0.49
MRPL54Q6P161 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
MRPL54Q6P161 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
MRPL54Q6P161 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms