Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 AL390754.1-201ENST00000619088 582 ntBASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 AL590560.3-201ENST00000623350 461 ntBASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 AL033527.5-202ENST00000641632 1098 ntBASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 AC087499.5-201ENST00000452760 1342 ntBASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
LDLRAP1Q5SW96 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 MIR770-201ENST00000390219 98 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 PHKG1P2-201ENST00000457537 863 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 RN7SL618P-201ENST00000477850 296 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 AC093214.1-201ENST00000511688 1107 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 RNA5SP421-201ENST00000516864 134 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 AL390955.2-201ENST00000603032 514 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 AL450472.2-201ENST00000603663 1156 ntBASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LDLRAP1Q5SW96 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 HIST3H2BA-201ENST00000436555 524 ntBASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 AL512638.1-201ENST00000457493 794 ntBASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.8■□□□□ 0.12
LDLRAP1Q5SW96 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDLRAP1Q5SW96 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms