Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6AP1LQ52LC2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 AC112693.3-201ENST00000624819 1983 ntBASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 RNA5SP416-201ENST00000516838 111 ntBASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 FOXO1B-201ENST00000504678 1527 ntBASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6AP1LQ52LC2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AC009090.5-201ENST00000624886 2285 ntBASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 RNA5SP410-201ENST00000516285 106 ntBASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AC027307.2-201ENST00000591252 911 ntBASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 AC008267.7-201ENST00000624570 1194 ntBASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATP6AP1LQ52LC2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms