Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
USH1GQ495M9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
USH1GQ495M9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USH1GQ495M9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USH1GQ495M9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USH1GQ495M9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USH1GQ495M9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.12■□□□□ 0.49
USH1GQ495M9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USH1GQ495M9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USH1GQ495M9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 AL139384.1-201ENST00000612143 3047 ntBASIC18.12■□□□□ 0.49
USH1GQ495M9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.12■□□□□ 0.49
USH1GQ495M9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USH1GQ495M9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USH1GQ495M9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.11■□□□□ 0.49
USH1GQ495M9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.11■□□□□ 0.49
USH1GQ495M9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USH1GQ495M9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.11■□□□□ 0.49
USH1GQ495M9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.11■□□□□ 0.49
USH1GQ495M9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 AL033527.5-201ENST00000641382 801 ntBASIC18.11■□□□□ 0.49
USH1GQ495M9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.11■□□□□ 0.49
USH1GQ495M9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 AC112504.1-201ENST00000623415 1841 ntBASIC18.11■□□□□ 0.49
USH1GQ495M9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USH1GQ495M9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USH1GQ495M9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USH1GQ495M9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USH1GQ495M9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.1■□□□□ 0.49
USH1GQ495M9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
USH1GQ495M9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
USH1GQ495M9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.1■□□□□ 0.49
USH1GQ495M9 TMEM14DP-201ENST00000422205 345 ntBASIC18.1■□□□□ 0.49
USH1GQ495M9 U91328.1-201ENST00000437528 223 ntBASIC18.1■□□□□ 0.49
USH1GQ495M9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.1■□□□□ 0.49
USH1GQ495M9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.1■□□□□ 0.49
USH1GQ495M9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.1■□□□□ 0.49
USH1GQ495M9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USH1GQ495M9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.1■□□□□ 0.49
USH1GQ495M9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms