Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC007389.4-201ENST00000454674 793 ntBASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 SNX29P1-201ENST00000548357 1007 ntBASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC000095.1-201ENST00000603208 874 ntBASIC18.97■□□□□ 0.63
RFX7Q2KHR2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC092850.2-201ENST00000623821 2697 ntBASIC18.97■□□□□ 0.63
RFX7Q2KHR2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX7Q2KHR2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 TIMM17BP1-201ENST00000545713 516 ntBASIC18.96■□□□□ 0.63
RFX7Q2KHR2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 AC036164.1-201ENST00000570544 333 ntBASIC18.96■□□□□ 0.63
RFX7Q2KHR2 BRI3BPP1-201ENST00000594224 787 ntBASIC18.96■□□□□ 0.63
RFX7Q2KHR2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX7Q2KHR2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.96■□□□□ 0.62
RFX7Q2KHR2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 RPL5P21-201ENST00000404620 815 ntBASIC18.95■□□□□ 0.62
RFX7Q2KHR2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AL442647.2-201ENST00000429864 857 ntBASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC022210.1-201ENST00000449856 793 ntBASIC18.95■□□□□ 0.62
RFX7Q2KHR2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 RN7SL399P-201ENST00000471648 279 ntBASIC18.95■□□□□ 0.62
RFX7Q2KHR2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC017083.2-201ENST00000608069 979 ntBASIC18.95■□□□□ 0.62
RFX7Q2KHR2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX7Q2KHR2 SSR4P1-203ENST00000599569 2260 ntBASIC18.95■□□□□ 0.62
RFX7Q2KHR2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms