Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.13■□□□□ 0.33
SNRPFP62306 MIR770-201ENST00000390219 98 ntBASIC17.13■□□□□ 0.33
SNRPFP62306 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.13■□□□□ 0.33
SNRPFP62306 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 SRD5A3P1-201ENST00000603021 949 ntBASIC17.13■□□□□ 0.33
SNRPFP62306 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 AC004840.1-201ENST00000636359 365 ntBASIC17.13■□□□□ 0.33
SNRPFP62306 AL645728.2-202ENST00000641679 227 ntBASIC17.13■□□□□ 0.33
SNRPFP62306 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SNRPFP62306 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.13■□□□□ 0.33
SNRPFP62306 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SNRPFP62306 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRPFP62306 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
SNRPFP62306 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 FAM8A3P-201ENST00000427218 844 ntBASIC17.12■□□□□ 0.33
SNRPFP62306 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.12■□□□□ 0.33
SNRPFP62306 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
SNRPFP62306 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRPFP62306 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SNRPFP62306 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRPFP62306 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 AL121723.1-201ENST00000445194 1519 ntBASIC17.11■□□□□ 0.33
SNRPFP62306 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRPFP62306 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.11■□□□□ 0.33
SNRPFP62306 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.11■□□□□ 0.33
SNRPFP62306 MEP1AP4-201ENST00000423244 1087 ntBASIC17.11■□□□□ 0.33
SNRPFP62306 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 INGX-202ENST00000489074 768 ntBASIC17.11■□□□□ 0.33
SNRPFP62306 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRPFP62306 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.11■□□□□ 0.33
SNRPFP62306 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRPFP62306 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
SNRPFP62306 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRPFP62306 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.11■□□□□ 0.33
SNRPFP62306 AJ011932.1-201ENST00000621707 465 ntBASIC17.11■□□□□ 0.33
SNRPFP62306 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNRPFP62306 AC136621.1-201ENST00000624017 2304 ntBASIC17.11■□□□□ 0.33
SNRPFP62306 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRPFP62306 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms