Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 AC087499.5-201ENST00000452760 1342 ntBASIC16.72■□□□□ 0.27
SNX16P57768 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX16P57768 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX16P57768 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX16P57768 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 HIST3H2BA-201ENST00000436555 524 ntBASIC16.72■□□□□ 0.27
SNX16P57768 AC092183.1-201ENST00000469884 875 ntBASIC16.72■□□□□ 0.27
SNX16P57768 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.72■□□□□ 0.27
SNX16P57768 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SNX16P57768 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.72■□□□□ 0.27
SNX16P57768 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX16P57768 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SNX16P57768 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX16P57768 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX16P57768 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
SNX16P57768 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SNX16P57768 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
SNX16P57768 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SNX16P57768 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX16P57768 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.71■□□□□ 0.27
SNX16P57768 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX16P57768 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNX16P57768 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SNX16P57768 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX16P57768 SDHAP3-202ENST00000515467 728 ntBASIC16.71■□□□□ 0.27
SNX16P57768 IGHV3-42-201ENST00000520410 361 ntBASIC16.71■□□□□ 0.27
SNX16P57768 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX16P57768 HNRNPUP1-201ENST00000554987 333 ntBASIC16.71■□□□□ 0.27
SNX16P57768 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX16P57768 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.71■□□□□ 0.27
SNX16P57768 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.71■□□□□ 0.27
SNX16P57768 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX16P57768 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
SNX16P57768 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX16P57768 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNX16P57768 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SNX16P57768 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.71■□□□□ 0.27
SNX16P57768 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.71■□□□□ 0.27
SNX16P57768 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX16P57768 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX16P57768 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SNX16P57768 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX16P57768 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SNX16P57768 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX16P57768 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 AC018892.3-201ENST00000623986 2499 ntBASIC16.7■□□□□ 0.26
SNX16P57768 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX16P57768 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNX16P57768 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SNX16P57768 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX16P57768 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms