Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 INTS4P2-202ENST00000614726 2019 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 USP32P1-208ENST00000506594 1164 ntBASIC15.57■□□□□ 0.08
CLDN2P57739 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 TDH-203ENST00000531764 1110 ntBASIC15.57■□□□□ 0.08
CLDN2P57739 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 BTNL10-201ENST00000595971 695 ntBASIC15.57■□□□□ 0.08
CLDN2P57739 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 AC008741.2-201ENST00000612792 3115 ntBASIC15.57■□□□□ 0.08
CLDN2P57739 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.57■□□□□ 0.08
CLDN2P57739 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 AL121723.1-201ENST00000445194 1519 ntBASIC15.57■□□□□ 0.08
CLDN2P57739 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN2P57739 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN2P57739 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CLDN2P57739 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN2P57739 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN2P57739 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN2P57739 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CLDN2P57739 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN2P57739 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN2P57739 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN2P57739 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms