Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA2D1P54289 AC007541.1-201ENST00000570282 1469 ntBASIC16.8■□□□□ 0.28
CACNA2D1P54289 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA2D1P54289 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 DBET-201ENST00000630918 3363 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 PIN1P1-201ENST00000412108 996 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 API5-211ENST00000534695 560 ntTSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC023310.3-201ENST00000557027 670 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC100756.1-201ENST00000562736 682 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC138749.3-201ENST00000567691 622 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC097359.3-201ENST00000603982 1210 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 AC116165.1-201ENST00000611806 668 ntBASIC16.79■□□□□ 0.28
CACNA2D1P54289 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CACNA2D1P54289 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CACNA2D1P54289 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AC112504.1-201ENST00000623415 1841 ntBASIC16.78■□□□□ 0.28
CACNA2D1P54289 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 RPL13P2-201ENST00000440687 659 ntBASIC16.78■□□□□ 0.28
CACNA2D1P54289 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AP005018.1-201ENST00000525475 301 ntBASIC16.78■□□□□ 0.28
CACNA2D1P54289 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AC092337.1-201ENST00000568699 1129 ntBASIC16.78■□□□□ 0.28
CACNA2D1P54289 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AL450472.2-201ENST00000603663 1156 ntBASIC16.78■□□□□ 0.28
CACNA2D1P54289 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CACNA2D1P54289 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CACNA2D1P54289 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA2D1P54289 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA2D1P54289 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CACNA2D1P54289 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms