Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLCN4P51793 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLCN4P51793 AC099548.2-209ENST00000480264 625 ntBASIC16.55■□□□□ 0.24
CLCN4P51793 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN4P51793 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN4P51793 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN4P51793 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN4P51793 AC103810.3-201ENST00000583567 96 ntBASIC16.55■□□□□ 0.24
CLCN4P51793 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLCN4P51793 AC093813.1-201ENST00000605066 256 ntBASIC16.55■□□□□ 0.24
CLCN4P51793 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 AC008687.7-202ENST00000637404 953 ntBASIC16.55■□□□□ 0.24
CLCN4P51793 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN4P51793 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CLCN4P51793 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN4P51793 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CLCN4P51793 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 C2orf27AP3-201ENST00000434123 579 ntBASIC16.54■□□□□ 0.24
CLCN4P51793 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCN4P51793 RPL13AP20-201ENST00000459725 609 ntBASIC16.54■□□□□ 0.24
CLCN4P51793 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.54■□□□□ 0.24
CLCN4P51793 AL354718.3-201ENST00000616414 581 ntBASIC16.54■□□□□ 0.24
CLCN4P51793 CR382287.1-201ENST00000623954 586 ntBASIC16.54■□□□□ 0.24
CLCN4P51793 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
CLCN4P51793 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLCN4P51793 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN4P51793 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.54■□□□□ 0.24
CLCN4P51793 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.54■□□□□ 0.24
CLCN4P51793 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLCN4P51793 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLCN4P51793 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCN4P51793 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 CNN2P8-201ENST00000421872 913 ntBASIC16.53■□□□□ 0.24
CLCN4P51793 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 RN7SL560P-201ENST00000577943 264 ntBASIC16.53■□□□□ 0.24
CLCN4P51793 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.53■□□□□ 0.24
CLCN4P51793 AC107373.2-201ENST00000607735 490 ntBASIC16.53■□□□□ 0.24
CLCN4P51793 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCN4P51793 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms