Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK7P50613 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK7P50613 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDK7P50613 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK7P50613 CALR4P-201ENST00000431943 946 ntBASIC17.41■□□□□ 0.38
CDK7P50613 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK7P50613 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK7P50613 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.41■□□□□ 0.38
CDK7P50613 RNA5SP423-201ENST00000517127 109 ntBASIC17.41■□□□□ 0.38
CDK7P50613 AP001258.2-201ENST00000529891 490 ntBASIC17.41■□□□□ 0.38
CDK7P50613 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.41■□□□□ 0.38
CDK7P50613 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.41■□□□□ 0.38
CDK7P50613 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK7P50613 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.41■□□□□ 0.38
CDK7P50613 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK7P50613 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.41■□□□□ 0.38
CDK7P50613 AC093813.1-201ENST00000605066 256 ntBASIC17.41■□□□□ 0.38
CDK7P50613 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK7P50613 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.41■□□□□ 0.38
CDK7P50613 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK7P50613 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK7P50613 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK7P50613 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK7P50613 AGGF1P2-201ENST00000426656 2106 ntBASIC17.41■□□□□ 0.38
CDK7P50613 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDK7P50613 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK7P50613 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDK7P50613 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK7P50613 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 OR6D1P-203ENST00000641209 4860 ntBASIC17.4■□□□□ 0.38
CDK7P50613 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDK7P50613 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.4■□□□□ 0.38
CDK7P50613 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK7P50613 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK7P50613 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK7P50613 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK7P50613 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 PCDHB19P-201ENST00000570871 2371 ntBASIC17.4■□□□□ 0.38
CDK7P50613 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK7P50613 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 AL121723.1-201ENST00000445194 1519 ntBASIC17.4■□□□□ 0.38
CDK7P50613 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
CDK7P50613 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 AC005915.1-201ENST00000624912 2018 ntBASIC17.4■□□□□ 0.38
CDK7P50613 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK7P50613 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDK7P50613 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
CDK7P50613 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.39■□□□□ 0.38
CDK7P50613 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDK7P50613 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDK7P50613 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 AL450472.2-201ENST00000603663 1156 ntBASIC17.39■□□□□ 0.37
CDK7P50613 AC106872.11-201ENST00000605838 421 ntBASIC17.39■□□□□ 0.37
CDK7P50613 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms