Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 GPAA1P2-202ENST00000606848 1787 ntBASIC14.98□□□□□ -0.01
CLK1P49759 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLK1P49759 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 PMS2P7-201ENST00000506558 1336 ntBASIC14.98□□□□□ -0.01
CLK1P49759 CDC14C-201ENST00000428251 1719 ntBASIC14.98□□□□□ -0.01
CLK1P49759 LINC01144-201ENST00000626198 1710 ntBASIC14.98□□□□□ -0.01
CLK1P49759 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 AL031731.1-201ENST00000642131 2094 ntBASIC14.98□□□□□ -0.01
CLK1P49759 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLK1P49759 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.98□□□□□ -0.01
CLK1P49759 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.98□□□□□ -0.01
CLK1P49759 AC112191.1-201ENST00000523689 701 ntBASIC14.98□□□□□ -0.01
CLK1P49759 AC002347.1-201ENST00000569543 541 ntBASIC14.98□□□□□ -0.01
CLK1P49759 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLK1P49759 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
CLK1P49759 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLK1P49759 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLK1P49759 AC087386.2-201ENST00000623212 4637 ntBASIC14.97□□□□□ -0.01
CLK1P49759 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 AC112504.1-201ENST00000623415 1841 ntBASIC14.97□□□□□ -0.01
CLK1P49759 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.97□□□□□ -0.01
CLK1P49759 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.97□□□□□ -0.01
CLK1P49759 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.97□□□□□ -0.01
CLK1P49759 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.97□□□□□ -0.01
CLK1P49759 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CLK1P49759 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.97□□□□□ -0.01
CLK1P49759 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLK1P49759 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CLK1P49759 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms