Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 INE2-201ENST00000630399 1874 ntBASIC17.49■□□□□ 0.39
CENPFP49454 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.49■□□□□ 0.39
CENPFP49454 AC132192.2-201ENST00000596206 1147 ntBASIC17.49■□□□□ 0.39
CENPFP49454 BNIP3P13-201ENST00000599968 566 ntBASIC17.49■□□□□ 0.39
CENPFP49454 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CENPFP49454 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPFP49454 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.49■□□□□ 0.39
CENPFP49454 AC007663.3-201ENST00000609632 465 ntBASIC17.49■□□□□ 0.39
CENPFP49454 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPFP49454 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CENPFP49454 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPFP49454 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CENPFP49454 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 KRT18P25-201ENST00000508931 1278 ntBASIC17.48■□□□□ 0.39
CENPFP49454 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CENPFP49454 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 NOC2LP2-201ENST00000407594 1944 ntBASIC17.48■□□□□ 0.39
CENPFP49454 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.48■□□□□ 0.39
CENPFP49454 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.48■□□□□ 0.39
CENPFP49454 AC132938.4-201ENST00000623835 848 ntBASIC17.48■□□□□ 0.39
CENPFP49454 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CENPFP49454 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.48■□□□□ 0.39
CENPFP49454 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPFP49454 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPFP49454 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPFP49454 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 FGFR3P1-201ENST00000449999 601 ntBASIC17.47■□□□□ 0.39
CENPFP49454 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.47■□□□□ 0.39
CENPFP49454 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPFP49454 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPFP49454 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.47■□□□□ 0.39
CENPFP49454 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CENPFP49454 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPFP49454 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPFP49454 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.47■□□□□ 0.39
CENPFP49454 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.47■□□□□ 0.39
CENPFP49454 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CENPFP49454 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPFP49454 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPFP49454 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.47■□□□□ 0.39
CENPFP49454 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 AL138799.1-201ENST00000448213 1675 ntBASIC17.47■□□□□ 0.39
CENPFP49454 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CENPFP49454 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
CENPFP49454 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.46■□□□□ 0.39
CENPFP49454 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CENPFP49454 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CENPFP49454 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms