Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC092329.2-201ENST00000598402 547 ntBASIC12.59□□□□□ -0.39
CDC34P49427 AL365330.1-201ENST00000607459 531 ntBASIC12.59□□□□□ -0.39
CDC34P49427 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 AC097493.4-201ENST00000641197 219 ntBASIC12.59□□□□□ -0.39
CDC34P49427 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CDC34P49427 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
CDC34P49427 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC34P49427 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 AP001282.1-201ENST00000531301 1499 ntBASIC12.59□□□□□ -0.39
CDC34P49427 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CDC34P49427 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC34P49427 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC34P49427 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC34P49427 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC34P49427 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.58□□□□□ -0.39
CDC34P49427 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
CDC34P49427 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 NUS1P2-201ENST00000417358 873 ntBASIC12.58□□□□□ -0.4
CDC34P49427 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC34P49427 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC34P49427 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 MIR5100-201ENST00000579544 119 ntBASIC12.58□□□□□ -0.4
CDC34P49427 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.58□□□□□ -0.4
CDC34P49427 AC021097.1-201ENST00000607902 574 ntBASIC12.58□□□□□ -0.4
CDC34P49427 AC012306.2-201ENST00000609350 630 ntBASIC12.58□□□□□ -0.4
CDC34P49427 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 AL805961.1-202ENST00000641562 540 ntBASIC12.58□□□□□ -0.4
CDC34P49427 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CDC34P49427 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC34P49427 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDC34P49427 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC34P49427 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC34P49427 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CDC34P49427 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC34P49427 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC34P49427 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
CDC34P49427 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC34P49427 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC34P49427 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.57□□□□□ -0.4
CDC34P49427 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms