Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.55□□□□□ -0.24
CDKN1AP38936 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDKN1AP38936 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CDKN1AP38936 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.54□□□□□ -0.24
CDKN1AP38936 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.54□□□□□ -0.24
CDKN1AP38936 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.54□□□□□ -0.24
CDKN1AP38936 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.54□□□□□ -0.24
CDKN1AP38936 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 AC243562.2-201ENST00000561247 970 ntBASIC13.54□□□□□ -0.24
CDKN1AP38936 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 AC008735.3-201ENST00000596646 500 ntBASIC13.54□□□□□ -0.24
CDKN1AP38936 AC010319.3-201ENST00000597028 470 ntBASIC13.54□□□□□ -0.24
CDKN1AP38936 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 KRT8P37-201ENST00000451609 1420 ntBASIC13.54□□□□□ -0.24
CDKN1AP38936 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.54□□□□□ -0.24
CDKN1AP38936 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CDKN1AP38936 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CDKN1AP38936 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDKN1AP38936 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.53□□□□□ -0.24
CDKN1AP38936 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CDKN1AP38936 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CDKN1AP38936 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CDKN1AP38936 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.53□□□□□ -0.24
CDKN1AP38936 AC004987.2-201ENST00000395959 1148 ntBASIC13.53□□□□□ -0.24
CDKN1AP38936 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.53□□□□□ -0.24
CDKN1AP38936 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CDKN1AP38936 AC092552.1-201ENST00000547243 906 ntBASIC13.53□□□□□ -0.24
CDKN1AP38936 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.53□□□□□ -0.24
CDKN1AP38936 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDKN1AP38936 AC036164.1-201ENST00000570544 333 ntBASIC13.53□□□□□ -0.24
CDKN1AP38936 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.53□□□□□ -0.24
CDKN1AP38936 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.53□□□□□ -0.24
CDKN1AP38936 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 MIR6799-201ENST00000620297 69 ntBASIC13.53□□□□□ -0.24
CDKN1AP38936 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.53□□□□□ -0.24
CDKN1AP38936 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CDKN1AP38936 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.53□□□□□ -0.24
CDKN1AP38936 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
CDKN1AP38936 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDKN1AP38936 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms