Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC005229.1-201ENST00000392885 409 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 AC004987.2-201ENST00000395959 1148 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 SOCS2P1-201ENST00000417727 557 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.98■□□□□ 0.47
CNGA1P29973 PFN1P12-201ENST00000455938 534 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 AC007551.1-201ENST00000457394 519 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.98■□□□□ 0.47
CNGA1P29973 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.98■□□□□ 0.47
CNGA1P29973 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CNGA1P29973 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.98■□□□□ 0.47
CNGA1P29973 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.98■□□□□ 0.47
CNGA1P29973 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNGA1P29973 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.98■□□□□ 0.47
CNGA1P29973 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.98■□□□□ 0.47
CNGA1P29973 AL691432.1-201ENST00000596308 1422 ntBASIC17.98■□□□□ 0.47
CNGA1P29973 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.97■□□□□ 0.47
CNGA1P29973 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.97■□□□□ 0.47
CNGA1P29973 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.97■□□□□ 0.47
CNGA1P29973 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.97■□□□□ 0.47
CNGA1P29973 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 RPL13P2-201ENST00000440687 659 ntBASIC17.97■□□□□ 0.47
CNGA1P29973 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.97■□□□□ 0.47
CNGA1P29973 AP001889.1-201ENST00000525414 633 ntBASIC17.97■□□□□ 0.47
CNGA1P29973 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.97■□□□□ 0.47
CNGA1P29973 ENPP7P5-201ENST00000541031 1031 ntBASIC17.97■□□□□ 0.47
CNGA1P29973 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.97■□□□□ 0.47
CNGA1P29973 BRI3BPP1-201ENST00000594224 787 ntBASIC17.97■□□□□ 0.47
CNGA1P29973 AC010328.2-201ENST00000597698 1111 ntBASIC17.97■□□□□ 0.47
CNGA1P29973 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.97■□□□□ 0.47
CNGA1P29973 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNGA1P29973 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.97■□□□□ 0.47
CNGA1P29973 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CNGA1P29973 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA1P29973 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.96■□□□□ 0.47
CNGA1P29973 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA1P29973 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA1P29973 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 CICP6-201ENST00000457191 2729 ntBASIC17.96■□□□□ 0.47
CNGA1P29973 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA1P29973 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CNGA1P29973 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA1P29973 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms