Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL1P22362 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL1P22362 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL1P22362 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCL1P22362 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCL1P22362 GPS2P2-201ENST00000430745 888 ntBASIC13.61□□□□□ -0.23
CCL1P22362 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL1P22362 DNAJB3-201ENST00000446806 729 ntBASIC13.61□□□□□ -0.23
CCL1P22362 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.61□□□□□ -0.23
CCL1P22362 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL1P22362 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL1P22362 AC093520.2-201ENST00000561830 333 ntBASIC13.61□□□□□ -0.23
CCL1P22362 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 AL671883.3-201ENST00000603274 991 ntBASIC13.61□□□□□ -0.23
CCL1P22362 AL133215.2-201ENST00000609242 977 ntBASIC13.61□□□□□ -0.23
CCL1P22362 AC007967.4-201ENST00000614700 386 ntBASIC13.61□□□□□ -0.23
CCL1P22362 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 MROH4P-201ENST00000431302 1578 ntBASIC13.61□□□□□ -0.23
CCL1P22362 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL1P22362 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL1P22362 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 AL035456.1-201ENST00000456064 1369 ntBASIC13.6□□□□□ -0.23
CCL1P22362 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 AC004461.1-201ENST00000412461 403 ntBASIC13.6□□□□□ -0.23
CCL1P22362 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL1P22362 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCL1P22362 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL1P22362 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL1P22362 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL1P22362 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL1P22362 AC084364.1-201ENST00000551967 1556 ntBASIC13.6□□□□□ -0.23
CCL1P22362 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms