Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.14□□□□□ -0.47
NTF3P20783 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 INTS4P1-201ENST00000438455 1935 ntBASIC12.14□□□□□ -0.47
NTF3P20783 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 TERF1P1-201ENST00000311003 1181 ntBASIC12.14□□□□□ -0.47
NTF3P20783 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NTF3P20783 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 AK4P3-201ENST00000418260 669 ntBASIC12.14□□□□□ -0.47
NTF3P20783 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.14□□□□□ -0.47
NTF3P20783 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.14□□□□□ -0.47
NTF3P20783 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.14□□□□□ -0.47
NTF3P20783 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.14□□□□□ -0.47
NTF3P20783 AC011498.5-201ENST00000592027 486 ntBASIC12.14□□□□□ -0.47
NTF3P20783 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.14□□□□□ -0.47
NTF3P20783 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.14□□□□□ -0.47
NTF3P20783 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NTF3P20783 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 AL590787.1-201ENST00000568856 1315 ntBASIC12.13□□□□□ -0.47
NTF3P20783 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.13□□□□□ -0.47
NTF3P20783 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
NTF3P20783 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 KRT8P26-201ENST00000534154 1276 ntBASIC12.13□□□□□ -0.47
NTF3P20783 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
NTF3P20783 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.13□□□□□ -0.47
NTF3P20783 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 AL390755.1-201ENST00000623716 2027 ntBASIC12.13□□□□□ -0.47
NTF3P20783 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.13□□□□□ -0.47
NTF3P20783 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NTF3P20783 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.13□□□□□ -0.47
NTF3P20783 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.12□□□□□ -0.47
NTF3P20783 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NTF3P20783 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms