Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NFKB1P19838 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NFKB1P19838 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.11■□□□□ 0.17
NFKB1P19838 TMBIM7P-203ENST00000641617 1718 ntBASIC16.11■□□□□ 0.17
NFKB1P19838 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NFKB1P19838 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
NFKB1P19838 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NFKB1P19838 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.11■□□□□ 0.17
NFKB1P19838 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NFKB1P19838 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.11■□□□□ 0.17
NFKB1P19838 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NFKB1P19838 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.11■□□□□ 0.17
NFKB1P19838 SPDYE12P-201ENST00000618416 771 ntBASIC16.11■□□□□ 0.17
NFKB1P19838 AC093028.1-201ENST00000622998 982 ntBASIC16.11■□□□□ 0.17
NFKB1P19838 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 TUBB3P1-201ENST00000405796 1332 ntBASIC16.11■□□□□ 0.17
NFKB1P19838 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.11■□□□□ 0.17
NFKB1P19838 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NFKB1P19838 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.11■□□□□ 0.17
NFKB1P19838 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NFKB1P19838 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
NFKB1P19838 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.1■□□□□ 0.17
NFKB1P19838 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 RPL37AP1-201ENST00000412502 279 ntBASIC16.1■□□□□ 0.17
NFKB1P19838 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.1■□□□□ 0.17
NFKB1P19838 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.1■□□□□ 0.17
NFKB1P19838 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.1■□□□□ 0.17
NFKB1P19838 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.1■□□□□ 0.17
NFKB1P19838 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NFKB1P19838 AC025678.2-201ENST00000562061 970 ntBASIC16.1■□□□□ 0.17
NFKB1P19838 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.1■□□□□ 0.17
NFKB1P19838 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.1■□□□□ 0.17
NFKB1P19838 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NFKB1P19838 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NFKB1P19838 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
NFKB1P19838 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NFKB1P19838 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.09■□□□□ 0.17
NFKB1P19838 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.09■□□□□ 0.17
NFKB1P19838 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.09■□□□□ 0.17
NFKB1P19838 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.09■□□□□ 0.17
NFKB1P19838 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.09■□□□□ 0.17
NFKB1P19838 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NFKB1P19838 AC125807.1-201ENST00000483097 614 ntBASIC16.09■□□□□ 0.17
NFKB1P19838 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms