Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC107890.1-201ENST00000422478 521 ntBASIC16■□□□□ 0.15
VCLP18206 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16■□□□□ 0.15
VCLP18206 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16■□□□□ 0.15
VCLP18206 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 CYMP-203ENST00000474680 1263 ntBASIC16■□□□□ 0.15
VCLP18206 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16■□□□□ 0.15
VCLP18206 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16■□□□□ 0.15
VCLP18206 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16■□□□□ 0.15
VCLP18206 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
VCLP18206 AC007967.4-201ENST00000614700 386 ntBASIC16■□□□□ 0.15
VCLP18206 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
VCLP18206 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16■□□□□ 0.15
VCLP18206 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16■□□□□ 0.15
VCLP18206 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16■□□□□ 0.15
VCLP18206 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCLP18206 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VCLP18206 AC008677.1-201ENST00000519230 1561 ntBASIC16■□□□□ 0.15
VCLP18206 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16■□□□□ 0.15
VCLP18206 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VCLP18206 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16■□□□□ 0.15
VCLP18206 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16■□□□□ 0.15
VCLP18206 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VCLP18206 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.99■□□□□ 0.15
VCLP18206 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.99■□□□□ 0.15
VCLP18206 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.99■□□□□ 0.15
VCLP18206 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.99■□□□□ 0.15
VCLP18206 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 MIR4453-201ENST00000584019 89 ntBASIC15.99■□□□□ 0.15
VCLP18206 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.99■□□□□ 0.15
VCLP18206 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VCLP18206 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VCLP18206 AC138035.3-201ENST00000622706 2791 ntBASIC15.98■□□□□ 0.15
VCLP18206 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.98■□□□□ 0.15
VCLP18206 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VCLP18206 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
VCLP18206 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VCLP18206 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VCLP18206 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.98■□□□□ 0.15
VCLP18206 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.98■□□□□ 0.15
VCLP18206 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.98■□□□□ 0.15
VCLP18206 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VCLP18206 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.98■□□□□ 0.15
VCLP18206 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.98■□□□□ 0.15
VCLP18206 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.98■□□□□ 0.15
VCLP18206 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.98■□□□□ 0.15
VCLP18206 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.98■□□□□ 0.15
VCLP18206 AC140878.1-201ENST00000565277 250 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms