Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP1P11387 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 AC007541.1-201ENST00000570282 1469 ntBASIC18.6■□□□□ 0.57
TOP1P11387 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TOP1P11387 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.6■□□□□ 0.57
TOP1P11387 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 AC074338.1-201ENST00000416825 156 ntBASIC18.6■□□□□ 0.57
TOP1P11387 AC136604.1-201ENST00000418535 575 ntBASIC18.6■□□□□ 0.57
TOP1P11387 AL589987.1-201ENST00000453380 819 ntBASIC18.6■□□□□ 0.57
TOP1P11387 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP1P11387 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 HNRNPUP1-201ENST00000554987 333 ntBASIC18.6■□□□□ 0.57
TOP1P11387 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 AL132655.2-201ENST00000596276 594 ntBASIC18.6■□□□□ 0.57
TOP1P11387 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TOP1P11387 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TOP1P11387 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP1P11387 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP1P11387 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP1P11387 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.59■□□□□ 0.57
TOP1P11387 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.59■□□□□ 0.57
TOP1P11387 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TOP1P11387 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TOP1P11387 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 AC015922.1-201ENST00000421102 1152 ntBASIC18.59■□□□□ 0.57
TOP1P11387 DFFBP1-201ENST00000433250 979 ntBASIC18.59■□□□□ 0.57
TOP1P11387 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.59■□□□□ 0.57
TOP1P11387 AC093004.1-201ENST00000508850 424 ntBASIC18.59■□□□□ 0.57
TOP1P11387 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP1P11387 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP1P11387 SPDYE22P-201ENST00000582158 798 ntBASIC18.59■□□□□ 0.57
TOP1P11387 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TOP1P11387 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.59■□□□□ 0.57
TOP1P11387 LINC01115-203ENST00000606068 577 ntBASIC18.59■□□□□ 0.57
TOP1P11387 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP1P11387 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP1P11387 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TOP1P11387 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP1P11387 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
TOP1P11387 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP1P11387 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
TOP1P11387 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TOP1P11387 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TOP1P11387 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TOP1P11387 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TOP1P11387 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms