Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 AP001059.3-201ENST00000619053 235 ntBASIC17.41■□□□□ 0.38
EPB41P11171 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.41■□□□□ 0.38
EPB41P11171 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPB41P11171 AC013268.4-201ENST00000637413 2228 ntBASIC17.41■□□□□ 0.38
EPB41P11171 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.41■□□□□ 0.38
EPB41P11171 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.41■□□□□ 0.38
EPB41P11171 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPB41P11171 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.41■□□□□ 0.38
EPB41P11171 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPB41P11171 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EPB41P11171 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
EPB41P11171 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 TNRC18P2-201ENST00000417666 2714 ntBASIC17.4■□□□□ 0.38
EPB41P11171 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.4■□□□□ 0.38
EPB41P11171 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.4■□□□□ 0.38
EPB41P11171 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 SPDYE7P-202ENST00000420373 878 ntBASIC17.4■□□□□ 0.38
EPB41P11171 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
EPB41P11171 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.4■□□□□ 0.38
EPB41P11171 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 MIR4313-201ENST00000580760 101 ntBASIC17.4■□□□□ 0.38
EPB41P11171 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
EPB41P11171 AL596442.2-201ENST00000610240 980 ntBASIC17.4■□□□□ 0.38
EPB41P11171 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 AC073347.1-201ENST00000421633 2643 ntBASIC17.4■□□□□ 0.38
EPB41P11171 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.4■□□□□ 0.38
EPB41P11171 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
EPB41P11171 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.4■□□□□ 0.38
EPB41P11171 AL035456.1-201ENST00000456064 1369 ntBASIC17.4■□□□□ 0.38
EPB41P11171 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPB41P11171 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.4■□□□□ 0.38
EPB41P11171 AC092127.1-201ENST00000567093 3455 ntBASIC17.4■□□□□ 0.38
EPB41P11171 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPB41P11171 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
EPB41P11171 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPB41P11171 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EPB41P11171 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPB41P11171 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPB41P11171 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.39■□□□□ 0.37
EPB41P11171 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.39■□□□□ 0.37
EPB41P11171 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
EPB41P11171 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EPB41P11171 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.39■□□□□ 0.37
EPB41P11171 MIR1233-2-201ENST00000408138 82 ntBASIC17.39■□□□□ 0.37
EPB41P11171 MIR1233-1-201ENST00000408722 82 ntBASIC17.39■□□□□ 0.37
EPB41P11171 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.39■□□□□ 0.37
EPB41P11171 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.39■□□□□ 0.37
EPB41P11171 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
EPB41P11171 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.39■□□□□ 0.37
EPB41P11171 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.39■□□□□ 0.37
EPB41P11171 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.39■□□□□ 0.37
EPB41P11171 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPB41P11171 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.39■□□□□ 0.37
EPB41P11171 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms