Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 AC007967.4-201ENST00000614700 386 ntBASIC14.6□□□□□ -0.07
THBS1P07996 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.6□□□□□ -0.07
THBS1P07996 AC009093.7-201ENST00000623853 1223 ntBASIC14.6□□□□□ -0.07
THBS1P07996 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
THBS1P07996 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
THBS1P07996 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
THBS1P07996 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
THBS1P07996 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 AC112693.3-201ENST00000624819 1983 ntBASIC14.6□□□□□ -0.07
THBS1P07996 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 LINC00554-201ENST00000564841 3011 ntBASIC14.6□□□□□ -0.07
THBS1P07996 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 AC103702.1-201ENST00000548801 2630 ntBASIC14.6□□□□□ -0.07
THBS1P07996 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
THBS1P07996 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 HYMAI-201ENST00000635591 3347 ntBASIC14.59□□□□□ -0.07
THBS1P07996 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
THBS1P07996 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
THBS1P07996 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
THBS1P07996 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
THBS1P07996 RBPMS2P1-201ENST00000437762 623 ntBASIC14.59□□□□□ -0.07
THBS1P07996 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.59□□□□□ -0.07
THBS1P07996 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 RN7SL275P-201ENST00000582762 335 ntBASIC14.59□□□□□ -0.07
THBS1P07996 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.59□□□□□ -0.07
THBS1P07996 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
THBS1P07996 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.59□□□□□ -0.07
THBS1P07996 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.59□□□□□ -0.07
THBS1P07996 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 AC138035.3-201ENST00000622706 2791 ntBASIC14.59□□□□□ -0.07
THBS1P07996 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
THBS1P07996 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
THBS1P07996 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.59□□□□□ -0.07
THBS1P07996 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
THBS1P07996 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
THBS1P07996 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
THBS1P07996 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
THBS1P07996 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
THBS1P07996 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.58□□□□□ -0.07
THBS1P07996 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.58□□□□□ -0.07
THBS1P07996 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
THBS1P07996 AC009090.5-201ENST00000624886 2285 ntBASIC14.58□□□□□ -0.08
THBS1P07996 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.58□□□□□ -0.08
THBS1P07996 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
THBS1P07996 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
THBS1P07996 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 AC144831.1-201ENST00000573312 2656 ntBASIC14.58□□□□□ -0.08
THBS1P07996 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.58□□□□□ -0.08
THBS1P07996 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
THBS1P07996 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms