Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.66■□□□□ 0.1
PCCBP05166 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCCBP05166 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.66■□□□□ 0.1
PCCBP05166 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCCBP05166 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.66■□□□□ 0.1
PCCBP05166 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.66■□□□□ 0.1
PCCBP05166 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.66■□□□□ 0.1
PCCBP05166 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCCBP05166 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCCBP05166 AC024909.3-201ENST00000611513 2257 ntBASIC15.66■□□□□ 0.1
PCCBP05166 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.66■□□□□ 0.1
PCCBP05166 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCCBP05166 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PCCBP05166 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCCBP05166 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCCBP05166 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.65■□□□□ 0.1
PCCBP05166 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.65■□□□□ 0.1
PCCBP05166 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.65■□□□□ 0.1
PCCBP05166 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 INE1-201ENST00000456273 945 ntBASIC15.65■□□□□ 0.1
PCCBP05166 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.65■□□□□ 0.1
PCCBP05166 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.65■□□□□ 0.1
PCCBP05166 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.65■□□□□ 0.1
PCCBP05166 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCCBP05166 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.65■□□□□ 0.1
PCCBP05166 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCCBP05166 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.65■□□□□ 0.1
PCCBP05166 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCCBP05166 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
PCCBP05166 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.64■□□□□ 0.09
PCCBP05166 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.64■□□□□ 0.09
PCCBP05166 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.64■□□□□ 0.09
PCCBP05166 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.64■□□□□ 0.09
PCCBP05166 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.64■□□□□ 0.09
PCCBP05166 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.64■□□□□ 0.09
PCCBP05166 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 RN7SL399P-201ENST00000471648 279 ntBASIC15.64■□□□□ 0.09
PCCBP05166 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCCBP05166 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.64■□□□□ 0.09
PCCBP05166 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
PCCBP05166 AL391069.4-201ENST00000609583 481 ntBASIC15.64■□□□□ 0.09
PCCBP05166 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.64■□□□□ 0.09
PCCBP05166 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PCCBP05166 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCCBP05166 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCCBP05166 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCCBP05166 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCCBP05166 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCCBP05166 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.63■□□□□ 0.09
PCCBP05166 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms