Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 AC005702.4-201ENST00000618393 416 ntBASIC12.25□□□□□ -0.45
TRBV12-3P01733 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.25□□□□□ -0.45
TRBV12-3P01733 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TRBV12-3P01733 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.25□□□□□ -0.45
TRBV12-3P01733 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRBV12-3P01733 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 MRPS18AP1-201ENST00000414458 589 ntBASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC074338.1-201ENST00000416825 156 ntBASIC12.24□□□□□ -0.45
TRBV12-3P01733 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC009477.1-201ENST00000452936 217 ntBASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 AC008738.7-201ENST00000609744 511 ntBASIC12.24□□□□□ -0.45
TRBV12-3P01733 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRBV12-3P01733 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.24□□□□□ -0.45
TRBV12-3P01733 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.23□□□□□ -0.45
TRBV12-3P01733 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
TRBV12-3P01733 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.23□□□□□ -0.45
TRBV12-3P01733 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 AC022144.1-201ENST00000602255 1580 ntBASIC12.23□□□□□ -0.45
TRBV12-3P01733 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRBV12-3P01733 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.23□□□□□ -0.45
TRBV12-3P01733 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms