Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-CO1P00395 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-CO1P00395 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-CO1P00395 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
MT-CO1P00395 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
MT-CO1P00395 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MT-CO1P00395 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MT-CO1P00395 AC010491.1-201ENST00000563101 2797 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 AL365203.3-201ENST00000609742 2057 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 AC018892.3-201ENST00000623986 2499 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.26■□□□□ 0.19
MT-CO1P00395 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-CO1P00395 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 MIR648-201ENST00000385046 94 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-CO1P00395 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 GNAQP1-201ENST00000444815 1067 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-CO1P00395 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MT-CO1P00395 SDHAP3-202ENST00000515467 728 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-CO1P00395 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-CO1P00395 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.26■□□□□ 0.19
MT-CO1P00395 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 AC009118.2-201ENST00000613275 655 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.26■□□□□ 0.19
MT-CO1P00395 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-CO1P00395 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
MT-CO1P00395 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-CO1P00395 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-CO1P00395 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-CO1P00395 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MT-CO1P00395 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 BTBD7P1-201ENST00000447253 1453 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 AC104794.3-201ENST00000566840 1248 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 AC025048.3-201ENST00000590609 569 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 AC005702.4-201ENST00000618393 416 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 AC004461.2-201ENST00000629517 803 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 REXO1L1P-202ENST00000608646 1974 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 DBET-201ENST00000630918 3363 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MT-CO1P00395 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-CO1P00395 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-CO1P00395 NORAD-201ENST00000565493 5339 ntBASIC16.25■□□□□ 0.19
MT-CO1P00395 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-CO1P00395 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-CO1P00395 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-CO1P00395 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
MT-CO1P00395 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms