Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
PMPCBO75439 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 SPDYE17-201ENST00000412399 783 ntBASIC16.11■□□□□ 0.17
PMPCBO75439 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.11■□□□□ 0.17
PMPCBO75439 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.11■□□□□ 0.17
PMPCBO75439 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 KRT8P12-202ENST00000472924 1397 ntBASIC16.11■□□□□ 0.17
PMPCBO75439 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PMPCBO75439 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PMPCBO75439 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PMPCBO75439 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PMPCBO75439 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PMPCBO75439 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.1■□□□□ 0.17
PMPCBO75439 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PMPCBO75439 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.1■□□□□ 0.17
PMPCBO75439 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PMPCBO75439 KLF2P3-201ENST00000451977 1087 ntBASIC16.1■□□□□ 0.17
PMPCBO75439 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.1■□□□□ 0.17
PMPCBO75439 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.1■□□□□ 0.17
PMPCBO75439 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.1■□□□□ 0.17
PMPCBO75439 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.1■□□□□ 0.17
PMPCBO75439 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.1■□□□□ 0.17
PMPCBO75439 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PMPCBO75439 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PMPCBO75439 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.1■□□□□ 0.17
PMPCBO75439 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PMPCBO75439 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PMPCBO75439 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 AP002414.2-201ENST00000591780 3365 ntBASIC16.1■□□□□ 0.17
PMPCBO75439 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PMPCBO75439 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.1■□□□□ 0.17
PMPCBO75439 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.09■□□□□ 0.17
PMPCBO75439 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
PMPCBO75439 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.09■□□□□ 0.17
PMPCBO75439 RPL37AP1-201ENST00000412502 279 ntBASIC16.09■□□□□ 0.17
PMPCBO75439 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PMPCBO75439 HIST3H2BA-201ENST00000436555 524 ntBASIC16.09■□□□□ 0.17
PMPCBO75439 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 FAM86GP-201ENST00000448322 971 ntBASIC16.09■□□□□ 0.17
PMPCBO75439 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.09■□□□□ 0.17
PMPCBO75439 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.09■□□□□ 0.17
PMPCBO75439 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms