Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LCMT2O60294 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 AC009090.5-201ENST00000624886 2285 ntBASIC15.14■□□□□ 0.01
LCMT2O60294 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 KRT18P64-201ENST00000434946 1219 ntBASIC15.14■□□□□ 0.01
LCMT2O60294 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.14■□□□□ 0.01
LCMT2O60294 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.14■□□□□ 0.01
LCMT2O60294 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.14■□□□□ 0.01
LCMT2O60294 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.14■□□□□ 0.01
LCMT2O60294 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.14■□□□□ 0.01
LCMT2O60294 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.14■□□□□ 0.01
LCMT2O60294 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.14■□□□□ 0.01
LCMT2O60294 LINC01115-203ENST00000606068 577 ntBASIC15.14■□□□□ 0.01
LCMT2O60294 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 AC004840.1-201ENST00000636359 365 ntBASIC15.14■□□□□ 0.01
LCMT2O60294 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.14■□□□□ 0.01
LCMT2O60294 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LCMT2O60294 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.14■□□□□ 0.01
LCMT2O60294 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.14■□□□□ 0.01
LCMT2O60294 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCMT2O60294 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LCMT2O60294 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LCMT2O60294 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCMT2O60294 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.13■□□□□ 0.01
LCMT2O60294 FAM8A3P-201ENST00000427218 844 ntBASIC15.13■□□□□ 0.01
LCMT2O60294 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LCMT2O60294 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.13■□□□□ 0.01
LCMT2O60294 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.13■□□□□ 0.01
LCMT2O60294 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 INGX-202ENST00000489074 768 ntBASIC15.13■□□□□ 0.01
LCMT2O60294 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.13■□□□□ 0.01
LCMT2O60294 RNA5SP421-201ENST00000516864 134 ntBASIC15.13■□□□□ 0.01
LCMT2O60294 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.13■□□□□ 0.01
LCMT2O60294 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LCMT2O60294 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.13■□□□□ 0.01
LCMT2O60294 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.13■□□□□ 0.01
LCMT2O60294 AC004461.2-201ENST00000629517 803 ntBASIC15.13■□□□□ 0.01
LCMT2O60294 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LCMT2O60294 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
LCMT2O60294 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LCMT2O60294 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
LCMT2O60294 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 AC105250.1-201ENST00000509378 2057 ntBASIC15.12■□□□□ 0.01
LCMT2O60294 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.12■□□□□ 0.01
LCMT2O60294 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 AC103702.1-201ENST00000548801 2630 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms