Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6DO43924 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
PDE6DO43924 AC136759.1-202ENST00000530858 2194 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.33□□□□□ -0.44
PDE6DO43924 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.33□□□□□ -0.44
PDE6DO43924 TSPY5P-201ENST00000426936 936 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 SPDYE13P-201ENST00000445314 798 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 ABCD1P5-201ENST00000445663 754 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 AC091607.1-201ENST00000490318 1060 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 KRT8P26-201ENST00000534154 1276 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 AC010203.1-204ENST00000548782 407 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.33□□□□□ -0.44
PDE6DO43924 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.33□□□□□ -0.44
PDE6DO43924 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
PDE6DO43924 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
PDE6DO43924 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 AC009090.5-201ENST00000624886 2285 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
PDE6DO43924 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 BX640514.1-201ENST00000583223 1918 ntBASIC12.33□□□□□ -0.44
PDE6DO43924 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.33□□□□□ -0.44
PDE6DO43924 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.33□□□□□ -0.44
PDE6DO43924 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PDE6DO43924 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
PDE6DO43924 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.32□□□□□ -0.44
PDE6DO43924 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 RNF152P1-201ENST00000397754 604 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 RCN1P2-201ENST00000398357 915 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.32□□□□□ -0.44
PDE6DO43924 TSPY15P-201ENST00000457163 923 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.32□□□□□ -0.44
PDE6DO43924 AC011498.5-201ENST00000592027 486 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 AC021097.1-201ENST00000607902 574 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms