Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 GPX1P2-201ENST00000429271 606 ntBASIC14.49□□□□□ -0.09
RNF13O43567 HTR5BP-201ENST00000430851 1154 ntBASIC14.49□□□□□ -0.09
RNF13O43567 MKNK2P1-201ENST00000437526 628 ntBASIC14.49□□□□□ -0.09
RNF13O43567 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.49□□□□□ -0.09
RNF13O43567 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 AC079140.1-201ENST00000508039 487 ntBASIC14.49□□□□□ -0.09
RNF13O43567 KRT8P48-201ENST00000515599 1220 ntBASIC14.49□□□□□ -0.09
RNF13O43567 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.49□□□□□ -0.09
RNF13O43567 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 UXT-AS1-201ENST00000590504 1525 ntBASIC14.49□□□□□ -0.09
RNF13O43567 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF13O43567 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RNF13O43567 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RNF13O43567 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF13O43567 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 FOXO1B-201ENST00000504678 1527 ntBASIC14.48□□□□□ -0.09
RNF13O43567 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 AC134407.2-201ENST00000625089 1978 ntBASIC14.48□□□□□ -0.09
RNF13O43567 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 ADH5P3-201ENST00000433842 1137 ntBASIC14.48□□□□□ -0.09
RNF13O43567 SPCS2P4-201ENST00000436160 681 ntBASIC14.48□□□□□ -0.09
RNF13O43567 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.48□□□□□ -0.09
RNF13O43567 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF13O43567 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RNF13O43567 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF13O43567 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF13O43567 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF13O43567 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF13O43567 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF13O43567 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF13O43567 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF13O43567 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF13O43567 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
RNF13O43567 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms