Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.43■□□□□ 0.22
MSI1O43347 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSI1O43347 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 PAUPAR-201ENST00000630360 2965 ntBASIC16.42■□□□□ 0.22
MSI1O43347 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.42■□□□□ 0.22
MSI1O43347 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 CICP13-201ENST00000422015 2789 ntBASIC16.42■□□□□ 0.22
MSI1O43347 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.42■□□□□ 0.22
MSI1O43347 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 COX20P2-201ENST00000452636 358 ntBASIC16.42■□□□□ 0.22
MSI1O43347 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.42■□□□□ 0.22
MSI1O43347 AC093004.1-201ENST00000508850 424 ntBASIC16.42■□□□□ 0.22
MSI1O43347 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MSI1O43347 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.42■□□□□ 0.22
MSI1O43347 API5-211ENST00000534695 560 ntTSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
MSI1O43347 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MSI1O43347 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MSI1O43347 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.42■□□□□ 0.22
MSI1O43347 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSI1O43347 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 SLC7A15P-201ENST00000424028 1363 ntBASIC16.41■□□□□ 0.22
MSI1O43347 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.41■□□□□ 0.22
MSI1O43347 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MSI1O43347 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 AC015922.1-201ENST00000421102 1152 ntBASIC16.41■□□□□ 0.22
MSI1O43347 DFFBP1-201ENST00000433250 979 ntBASIC16.41■□□□□ 0.22
MSI1O43347 MEIS3P1-201ENST00000495167 958 ntBASIC16.41■□□□□ 0.22
MSI1O43347 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.41■□□□□ 0.22
MSI1O43347 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.41■□□□□ 0.22
MSI1O43347 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 SPDYE22P-201ENST00000582158 798 ntBASIC16.41■□□□□ 0.22
MSI1O43347 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
MSI1O43347 CHCHD2P3-201ENST00000603038 451 ntBASIC16.41■□□□□ 0.22
MSI1O43347 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.41■□□□□ 0.22
MSI1O43347 AL662799.1-202ENST00000614205 422 ntBASIC16.41■□□□□ 0.22
MSI1O43347 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.41■□□□□ 0.22
MSI1O43347 AL158212.4-201ENST00000624062 1286 ntBASIC16.41■□□□□ 0.22
MSI1O43347 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.41■□□□□ 0.22
MSI1O43347 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
MSI1O43347 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSI1O43347 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.41■□□□□ 0.22
MSI1O43347 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MSI1O43347 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.4■□□□□ 0.22
MSI1O43347 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
MSI1O43347 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSI1O43347 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms