Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD1O14646 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD1O14646 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD1O14646 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC24.8■■□□□ 1.56
CHD1O14646 SCARNA21-201ENST00000517026 139 ntBASIC24.8■■□□□ 1.56
CHD1O14646 NAT9-220ENST00000582870 896 ntTSL 5 BASIC24.8■■□□□ 1.56
CHD1O14646 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
CHD1O14646 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC24.8■■□□□ 1.56
CHD1O14646 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC24.8■■□□□ 1.56
CHD1O14646 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD1O14646 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHD1O14646 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC24.79■■□□□ 1.56
CHD1O14646 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 HCG27-204ENST00000424675 895 ntTSL 3 BASIC24.79■■□□□ 1.56
CHD1O14646 AL627422.1-201ENST00000434104 580 ntBASIC24.79■■□□□ 1.56
CHD1O14646 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 AL390961.4-201ENST00000623958 2535 ntBASIC24.79■■□□□ 1.56
CHD1O14646 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CHD1O14646 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHD1O14646 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC24.79■■□□□ 1.56
CHD1O14646 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD1O14646 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 COX20P1-201ENST00000366529 357 ntBASIC24.78■■□□□ 1.56
CHD1O14646 AC239868.1-201ENST00000369385 493 ntBASIC24.78■■□□□ 1.56
CHD1O14646 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 AL583805.1-201ENST00000391389 531 ntBASIC24.78■■□□□ 1.56
CHD1O14646 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC24.78■■□□□ 1.56
CHD1O14646 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC24.78■■□□□ 1.56
CHD1O14646 MRPL22P1-201ENST00000505398 616 ntBASIC24.78■■□□□ 1.56
CHD1O14646 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD1O14646 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CHD1O14646 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD1O14646 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC24.78■■□□□ 1.56
CHD1O14646 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD1O14646 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.78■■□□□ 1.56
CHD1O14646 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC24.78■■□□□ 1.56
CHD1O14646 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CHD1O14646 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHD1O14646 AC009093.2-202ENST00000620513 2079 ntBASIC24.78■■□□□ 1.56
CHD1O14646 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
CHD1O14646 RN7SL81P-201ENST00000493781 261 ntBASIC24.78■■□□□ 1.56
CHD1O14646 ORAOV1P1-201ENST00000503108 395 ntBASIC24.78■■□□□ 1.56
CHD1O14646 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC24.78■■□□□ 1.56
CHD1O14646 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
CHD1O14646 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC24.77■■□□□ 1.56
CHD1O14646 PFN2-205ENST00000461868 613 ntTSL 2 BASIC24.77■■□□□ 1.56
CHD1O14646 RN7SL396P-201ENST00000471086 295 ntBASIC24.77■■□□□ 1.56
CHD1O14646 POU5F1P2-201ENST00000521750 823 ntBASIC24.77■■□□□ 1.56
CHD1O14646 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC24.77■■□□□ 1.56
CHD1O14646 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC24.77■■□□□ 1.56
CHD1O14646 PHBP15-201ENST00000574228 665 ntBASIC24.77■■□□□ 1.56
CHD1O14646 MIR4313-201ENST00000580760 101 ntBASIC24.77■■□□□ 1.56
CHD1O14646 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC24.77■■□□□ 1.56
CHD1O14646 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC24.77■■□□□ 1.56
CHD1O14646 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC24.77■■□□□ 1.56
CHD1O14646 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CHD1O14646 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD1O14646 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.56
CHD1O14646 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD1O14646 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC24.76■■□□□ 1.55
CHD1O14646 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD1O14646 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC24.76■■□□□ 1.55
CHD1O14646 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CHD1O14646 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC24.76■■□□□ 1.55
CHD1O14646 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD1O14646 MIR557-201ENST00000385239 98 ntBASIC24.76■■□□□ 1.55
CHD1O14646 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD1O14646 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC24.76■■□□□ 1.55
CHD1O14646 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC24.76■■□□□ 1.55
CHD1O14646 AC022616.1-201ENST00000518688 554 ntBASIC24.76■■□□□ 1.55
CHD1O14646 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC24.76■■□□□ 1.55
CHD1O14646 AC006158.1-201ENST00000610661 249 ntBASIC24.76■■□□□ 1.55
CHD1O14646 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHD1O14646 AL645728.2-202ENST00000641679 227 ntBASIC24.76■■□□□ 1.55
CHD1O14646 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CHD1O14646 FRMPD2B-201ENST00000431305 1347 ntBASIC24.76■■□□□ 1.55
CHD1O14646 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CHD1O14646 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC24.76■■□□□ 1.55
CHD1O14646 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC24.76■■□□□ 1.55
CHD1O14646 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHD1O14646 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CHD1O14646 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms