Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC073592.2-201ENST00000623062 780 ntBASIC26.43■■□□□ 1.82
CUX2O14529 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC26.43■■□□□ 1.82
CUX2O14529 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 AC105020.1-201ENST00000435356 2205 ntBASIC26.43■■□□□ 1.82
CUX2O14529 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CUX2O14529 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC26.43■■□□□ 1.82
CUX2O14529 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
CUX2O14529 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CUX2O14529 NF2-208ENST00000403435 2568 ntTSL 5 BASIC26.43■■□□□ 1.82
CUX2O14529 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CUX2O14529 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 SOD2-202ENST00000367054 815 ntTSL 2 BASIC26.42■■□□□ 1.82
CUX2O14529 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 AC104073.2-201ENST00000453737 312 ntBASIC26.42■■□□□ 1.82
CUX2O14529 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC26.42■■□□□ 1.82
CUX2O14529 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC26.42■■□□□ 1.82
CUX2O14529 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC26.42■■□□□ 1.82
CUX2O14529 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC26.42■■□□□ 1.82
CUX2O14529 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC26.42■■□□□ 1.82
CUX2O14529 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC26.42■■□□□ 1.82
CUX2O14529 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC26.42■■□□□ 1.82
CUX2O14529 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 B9D1-203ENST00000395615 805 ntTSL 3 BASIC26.42■■□□□ 1.82
CUX2O14529 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC26.42■■□□□ 1.82
CUX2O14529 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC26.42■■□□□ 1.82
CUX2O14529 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CUX2O14529 PUDPP3-201ENST00000445368 636 ntBASIC26.42■■□□□ 1.82
CUX2O14529 NAP1L6-202ENST00000641404 1222 ntBASIC26.42■■□□□ 1.82
CUX2O14529 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC26.42■■□□□ 1.82
CUX2O14529 VILL-207ENST00000465644 1857 ntTSL 5 BASIC26.42■■□□□ 1.82
CUX2O14529 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC26.41■■□□□ 1.82
CUX2O14529 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CUX2O14529 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CUX2O14529 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CUX2O14529 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 AL357563.1-201ENST00000404728 395 ntBASIC26.41■■□□□ 1.82
CUX2O14529 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC26.41■■□□□ 1.82
CUX2O14529 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC26.41■■□□□ 1.82
CUX2O14529 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC26.41■■□□□ 1.82
CUX2O14529 RCC2P8-201ENST00000502779 1035 ntBASIC26.41■■□□□ 1.82
CUX2O14529 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC26.41■■□□□ 1.82
CUX2O14529 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC26.41■■□□□ 1.82
CUX2O14529 MIR3677-201ENST00000578964 60 ntBASIC26.41■■□□□ 1.82
CUX2O14529 AL132994.2-201ENST00000603120 687 ntBASIC26.41■■□□□ 1.82
CUX2O14529 AC010503.4-201ENST00000615487 688 ntBASIC26.41■■□□□ 1.82
CUX2O14529 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
CUX2O14529 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
CUX2O14529 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CUX2O14529 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CUX2O14529 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
CUX2O14529 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC26.4■■□□□ 1.82
CUX2O14529 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
CUX2O14529 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
CUX2O14529 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC26.4■■□□□ 1.82
CUX2O14529 OR2K2-202ENST00000374428 1038 ntBASIC26.4■■□□□ 1.82
CUX2O14529 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 HNRNPA1P41-201ENST00000397777 928 ntBASIC26.4■■□□□ 1.82
CUX2O14529 AL136309.1-201ENST00000403917 691 ntBASIC26.4■■□□□ 1.82
CUX2O14529 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC26.4■■□□□ 1.82
CUX2O14529 RN7SL258P-201ENST00000478664 300 ntBASIC26.4■■□□□ 1.82
CUX2O14529 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CUX2O14529 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 AL627230.2-201ENST00000613254 655 ntBASIC26.4■■□□□ 1.82
CUX2O14529 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 ZNF436-AS1-201ENST00000335648 2547 ntBASIC26.4■■□□□ 1.82
CUX2O14529 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC26.4■■□□□ 1.82
CUX2O14529 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CUX2O14529 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC26.4■■□□□ 1.82
CUX2O14529 CAP2P1-201ENST00000557743 1390 ntBASIC26.39■■□□□ 1.82
CUX2O14529 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms