Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
O00370 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
O00370 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.9■□□□□ 0.3
O00370 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.9■□□□□ 0.3
O00370 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.9■□□□□ 0.3
O00370 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
O00370 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
O00370 AC006058.4-201ENST00000624016 1670 ntBASIC16.9■□□□□ 0.3
O00370 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
O00370 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
O00370 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
O00370 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
O00370 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.89■□□□□ 0.29
O00370 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
O00370 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.89■□□□□ 0.29
O00370 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.89■□□□□ 0.29
O00370 TSSK5P-201ENST00000423978 907 ntBASIC16.89■□□□□ 0.29
O00370 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.89■□□□□ 0.29
O00370 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 AC010336.2-201ENST00000564226 506 ntBASIC16.89■□□□□ 0.29
O00370 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.89■□□□□ 0.29
O00370 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.89■□□□□ 0.29
O00370 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.89■□□□□ 0.29
O00370 AC005498.2-205ENST00000593218 784 ntBASIC16.89■□□□□ 0.29
O00370 AC097359.3-201ENST00000603982 1210 ntBASIC16.89■□□□□ 0.29
O00370 AL844908.2-201ENST00000609461 460 ntBASIC16.89■□□□□ 0.29
O00370 AL590560.3-201ENST00000623350 461 ntBASIC16.89■□□□□ 0.29
O00370 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.89■□□□□ 0.29
O00370 PPT1-215ENST00000641471 2368 ntBASIC16.89■□□□□ 0.29
O00370 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
O00370 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
O00370 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.89■□□□□ 0.29
O00370 LINC02228-204ENST00000642115 2962 ntBASIC16.89■□□□□ 0.29
O00370 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
O00370 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
O00370 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.88■□□□□ 0.29
O00370 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
O00370 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
O00370 AC136604.1-201ENST00000418535 575 ntBASIC16.88■□□□□ 0.29
O00370 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
O00370 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.88■□□□□ 0.29
O00370 IGHV3-42-201ENST00000520410 361 ntBASIC16.88■□□□□ 0.29
O00370 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.88■□□□□ 0.29
O00370 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.88■□□□□ 0.29
O00370 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.88■□□□□ 0.29
O00370 MIR4313-201ENST00000580760 101 ntBASIC16.88■□□□□ 0.29
O00370 AL390754.1-201ENST00000619088 582 ntBASIC16.88■□□□□ 0.29
O00370 MIR6069-201ENST00000620069 79 ntBASIC16.88■□□□□ 0.29
O00370 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
O00370 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.88■□□□□ 0.29
O00370 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
O00370 AC087499.5-201ENST00000452760 1342 ntBASIC16.88■□□□□ 0.29
O00370 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
O00370 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.88■□□□□ 0.29
O00370 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.88■□□□□ 0.29
O00370 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
O00370 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
O00370 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms