Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MIR718-201ENST00000390190 70 ntBASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MFAP1P1-201ENST00000442257 1255 ntBASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC116562.2-201ENST00000507042 360 ntBASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AL512652.2-201ENST00000625156 1716 ntBASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC006277.1-201ENST00000624348 1610 ntBASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC023024.2-201ENST00000623561 1993 ntBASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC008687.5-201ENST00000593746 558 ntBASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PGM5P2-202ENST00000637225 1043 ntBASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.84□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.84□□□□□ -0.19
BOLA2-SMG1P6H3BVE0 AC113367.3-201ENST00000508316 1912 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms