Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TBC1D3FA6NER0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 BRI3BPP1-201ENST00000594224 787 ntBASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 AC097359.3-201ENST00000603982 1210 ntBASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TBC1D3FA6NER0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AC022210.1-201ENST00000449856 793 ntBASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 TDH-203ENST00000531764 1110 ntBASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 BTNL10-201ENST00000595971 695 ntBASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AL596087.1-201ENST00000400979 1969 ntBASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.72■□□□□ 0.11
TBC1D3FA6NER0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.71■□□□□ 0.11
TBC1D3FA6NER0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms